Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.42■□□□□ 0.38
GABPB1Q06547 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GABPB1Q06547 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GABPB1Q06547 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.42■□□□□ 0.38
GABPB1Q06547 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GABPB1Q06547 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABPB1Q06547 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GABPB1Q06547 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.42■□□□□ 0.38
GABPB1Q06547 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.42■□□□□ 0.38
GABPB1Q06547 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.41■□□□□ 0.38
GABPB1Q06547 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 AC006557.6-201ENST00000623071 864 ntBASIC17.41■□□□□ 0.38
GABPB1Q06547 AC067930.6-201ENST00000623257 4947 ntBASIC17.41■□□□□ 0.38
GABPB1Q06547 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 AC016027.1-202ENST00000607927 1699 ntBASIC17.41■□□□□ 0.38
GABPB1Q06547 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 PRAL-201ENST00000624952 3286 ntBASIC17.41■□□□□ 0.38
GABPB1Q06547 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABPB1Q06547 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.41■□□□□ 0.38
GABPB1Q06547 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GABPB1Q06547 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.4■□□□□ 0.38
GABPB1Q06547 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 AC068338.2-201ENST00000563278 1430 ntBASIC17.4■□□□□ 0.38
GABPB1Q06547 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
GABPB1Q06547 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 AC107918.4-201ENST00000641966 3141 ntBASIC17.4■□□□□ 0.38
GABPB1Q06547 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.4■□□□□ 0.38
GABPB1Q06547 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GABPB1Q06547 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GABPB1Q06547 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.4■□□□□ 0.38
GABPB1Q06547 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABPB1Q06547 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GABPB1Q06547 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GABPB1Q06547 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GABPB1Q06547 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GABPB1Q06547 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.39■□□□□ 0.38
GABPB1Q06547 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.39■□□□□ 0.37
GABPB1Q06547 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABPB1Q06547 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.39■□□□□ 0.37
GABPB1Q06547 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABPB1Q06547 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABPB1Q06547 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.39■□□□□ 0.37
GABPB1Q06547 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
GABPB1Q06547 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABPB1Q06547 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABPB1Q06547 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms