Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBA4AP68366 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TUBA4AP68366 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TUBA4AP68366 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.07■□□□□ 0.16
TUBA4AP68366 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA4AP68366 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA4AP68366 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TUBA4AP68366 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TUBA4AP68366 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TUBA4AP68366 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 AL391807.1-203ENST00000604392 2365 ntBASIC16.06■□□□□ 0.16
TUBA4AP68366 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA4AP68366 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TUBA4AP68366 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBA4AP68366 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 DDX43P3-201ENST00000441064 443 ntBASIC16.06■□□□□ 0.16
TUBA4AP68366 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBA4AP68366 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA4AP68366 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.06■□□□□ 0.16
TUBA4AP68366 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TUBA4AP68366 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA4AP68366 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA4AP68366 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 LINC02228-204ENST00000642115 2962 ntBASIC16.05■□□□□ 0.16
TUBA4AP68366 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TUBA4AP68366 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBA4AP68366 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TUBA4AP68366 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 HBZP1-201ENST00000354915 429 ntBASIC16.05■□□□□ 0.16
TUBA4AP68366 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA4AP68366 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA4AP68366 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBA4AP68366 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TUBA4AP68366 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBA4AP68366 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBA4AP68366 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TUBA4AP68366 AC009949.1-201ENST00000623048 1830 ntBASIC16.05■□□□□ 0.16
TUBA4AP68366 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA4AP68366 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA4AP68366 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBA4AP68366 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBA4AP68366 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBA4AP68366 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TUBA4AP68366 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 SPDYE13P-201ENST00000445314 798 ntBASIC16.04■□□□□ 0.16
TUBA4AP68366 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.04■□□□□ 0.16
TUBA4AP68366 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.04■□□□□ 0.16
TUBA4AP68366 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBA4AP68366 ZNF444P1-201ENST00000559497 298 ntBASIC16.04■□□□□ 0.16
TUBA4AP68366 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms