Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHB4P54760 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
EPHB4P54760 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
EPHB4P54760 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHB4P54760 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
EPHB4P54760 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHB4P54760 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.17■□□□□ 0.66
EPHB4P54760 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.17■□□□□ 0.66
EPHB4P54760 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.17■□□□□ 0.66
EPHB4P54760 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHB4P54760 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
EPHB4P54760 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.16■□□□□ 0.66
EPHB4P54760 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 AC023141.5-201ENST00000458585 616 ntBASIC19.16■□□□□ 0.66
EPHB4P54760 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 AJ011932.1-201ENST00000621707 465 ntBASIC19.16■□□□□ 0.66
EPHB4P54760 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 AC063926.2-201ENST00000623766 1308 ntBASIC19.16■□□□□ 0.66
EPHB4P54760 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHB4P54760 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHB4P54760 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EPHB4P54760 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHB4P54760 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 FAM86GP-201ENST00000448322 971 ntBASIC19.15■□□□□ 0.66
EPHB4P54760 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHB4P54760 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.15■□□□□ 0.66
EPHB4P54760 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.15■□□□□ 0.66
EPHB4P54760 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
EPHB4P54760 AC023141.13-201ENST00000604991 943 ntBASIC19.15■□□□□ 0.66
EPHB4P54760 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.15■□□□□ 0.66
EPHB4P54760 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHB4P54760 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.15■□□□□ 0.66
EPHB4P54760 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHB4P54760 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHB4P54760 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHB4P54760 AL121761.2-201ENST00000598007 1648 ntBASIC19.14■□□□□ 0.66
EPHB4P54760 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EPHB4P54760 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
EPHB4P54760 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB4P54760 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.14■□□□□ 0.65
EPHB4P54760 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
EPHB4P54760 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB4P54760 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EPHB4P54760 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB4P54760 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB4P54760 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms