Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CXCL1P1-201ENST00000502804 216 ntBASIC16.57■□□□□ 0.24
PDX1P52945 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.57■□□□□ 0.24
PDX1P52945 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.57■□□□□ 0.24
PDX1P52945 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
PDX1P52945 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PDX1P52945 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PDX1P52945 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.56■□□□□ 0.24
PDX1P52945 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.56■□□□□ 0.24
PDX1P52945 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.56■□□□□ 0.24
PDX1P52945 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 AC007064.4-201ENST00000637740 555 ntBASIC16.56■□□□□ 0.24
PDX1P52945 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
PDX1P52945 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.56■□□□□ 0.24
PDX1P52945 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDX1P52945 AC092919.2-201ENST00000623631 1645 ntBASIC16.56■□□□□ 0.24
PDX1P52945 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.55■□□□□ 0.24
PDX1P52945 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.55■□□□□ 0.24
PDX1P52945 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDX1P52945 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.55■□□□□ 0.24
PDX1P52945 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.55■□□□□ 0.24
PDX1P52945 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.55■□□□□ 0.24
PDX1P52945 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.55■□□□□ 0.24
PDX1P52945 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.55■□□□□ 0.24
PDX1P52945 AC068137.2-201ENST00000605408 478 ntBASIC16.55■□□□□ 0.24
PDX1P52945 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.55■□□□□ 0.24
PDX1P52945 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDX1P52945 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PDX1P52945 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PDX1P52945 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.55■□□□□ 0.24
PDX1P52945 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.55■□□□□ 0.24
PDX1P52945 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDX1P52945 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.54■□□□□ 0.24
PDX1P52945 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.54■□□□□ 0.24
PDX1P52945 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PDX1P52945 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 AC004461.1-201ENST00000412461 403 ntBASIC16.54■□□□□ 0.24
PDX1P52945 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PDX1P52945 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.54■□□□□ 0.24
PDX1P52945 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDX1P52945 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.54■□□□□ 0.24
PDX1P52945 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.54■□□□□ 0.24
PDX1P52945 ACTL9-202ENST00000612068 1252 ntBASIC16.54■□□□□ 0.24
PDX1P52945 AC105339.1-204ENST00000636249 355 ntBASIC16.54■□□□□ 0.24
PDX1P52945 AC139713.2-201ENST00000641328 2723 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms