Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GTF2A1P52655 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GTF2A1P52655 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.76■□□□□ 0.27
GTF2A1P52655 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1P52655 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1P52655 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.76■□□□□ 0.27
GTF2A1P52655 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
GTF2A1P52655 AL121906.2-201ENST00000621597 723 ntBASIC16.76■□□□□ 0.27
GTF2A1P52655 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.76■□□□□ 0.27
GTF2A1P52655 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1P52655 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GTF2A1P52655 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1P52655 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GTF2A1P52655 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1P52655 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.75■□□□□ 0.27
GTF2A1P52655 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 AL139385.1-201ENST00000611744 3272 ntBASIC16.75■□□□□ 0.27
GTF2A1P52655 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GTF2A1P52655 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1P52655 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 DUSP5P2-201ENST00000426873 1033 ntBASIC16.75■□□□□ 0.27
GTF2A1P52655 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GTF2A1P52655 RAP2CP1-201ENST00000605103 478 ntBASIC16.75■□□□□ 0.27
GTF2A1P52655 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1P52655 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GTF2A1P52655 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1P52655 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1P52655 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1P52655 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
GTF2A1P52655 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.74■□□□□ 0.27
GTF2A1P52655 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1P52655 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1P52655 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1P52655 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GTF2A1P52655 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 TUBB8P6-201ENST00000436895 1288 ntBASIC16.74■□□□□ 0.27
GTF2A1P52655 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.74■□□□□ 0.27
GTF2A1P52655 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
GTF2A1P52655 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.74■□□□□ 0.27
GTF2A1P52655 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms