Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF144AP50876 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
RNF144AP50876 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RNF144AP50876 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.9■□□□□ 0.14
RNF144AP50876 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
RNF144AP50876 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF144AP50876 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF144AP50876 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF144AP50876 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
RNF144AP50876 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF144AP50876 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF144AP50876 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF144AP50876 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF144AP50876 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF144AP50876 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF144AP50876 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF144AP50876 NKAPP1-205ENST00000585790 367 ntBASIC15.89■□□□□ 0.13
RNF144AP50876 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF144AP50876 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF144AP50876 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF144AP50876 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF144AP50876 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 AC092171.3-201ENST00000610122 2651 ntBASIC15.89■□□□□ 0.13
RNF144AP50876 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF144AP50876 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RNF144AP50876 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF144AP50876 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
RNF144AP50876 DUSP5P1-201ENST00000441325 1139 ntBASIC15.88■□□□□ 0.13
RNF144AP50876 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF144AP50876 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF144AP50876 SART3-203ENST00000546611 1184 ntBASIC15.88■□□□□ 0.13
RNF144AP50876 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF144AP50876 AC064862.7-201ENST00000604520 867 ntBASIC15.88■□□□□ 0.13
RNF144AP50876 AC008608.2-201ENST00000606089 416 ntBASIC15.88■□□□□ 0.13
RNF144AP50876 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RNF144AP50876 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF144AP50876 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF144AP50876 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF144AP50876 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 AC079776.2-201ENST00000641154 1609 ntBASIC15.87■□□□□ 0.13
RNF144AP50876 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RNF144AP50876 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF144AP50876 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF144AP50876 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 SIGLEC30P-201ENST00000455569 941 ntBASIC15.87■□□□□ 0.13
RNF144AP50876 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RNF144AP50876 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF144AP50876 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms