Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.98■□□□□ 0.47
TUBP50607 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.98■□□□□ 0.47
TUBP50607 AC004790.2-201ENST00000623588 572 ntBASIC17.98■□□□□ 0.47
TUBP50607 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.98■□□□□ 0.47
TUBP50607 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBP50607 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBP50607 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 AC108860.2-201ENST00000562760 2183 ntBASIC17.97■□□□□ 0.47
TUBP50607 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TUBP50607 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 AC022211.2-201ENST00000585075 2527 ntBASIC17.97■□□□□ 0.47
TUBP50607 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.97■□□□□ 0.47
TUBP50607 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.97■□□□□ 0.47
TUBP50607 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 GPALPP1-207ENST00000611650 899 ntBASIC17.97■□□□□ 0.47
TUBP50607 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TUBP50607 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TUBP50607 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TUBP50607 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBP50607 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBP50607 AL596257.1-201ENST00000641463 2694 ntBASIC17.96■□□□□ 0.47
TUBP50607 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TUBP50607 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TUBP50607 AC004832.2-201ENST00000426397 482 ntBASIC17.96■□□□□ 0.47
TUBP50607 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.96■□□□□ 0.47
TUBP50607 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.96■□□□□ 0.47
TUBP50607 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 AC002347.1-201ENST00000569543 541 ntBASIC17.96■□□□□ 0.47
TUBP50607 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TUBP50607 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.96■□□□□ 0.47
TUBP50607 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBP50607 AC011676.5-201ENST00000624864 2660 ntBASIC17.96■□□□□ 0.47
TUBP50607 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBP50607 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBP50607 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBP50607 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TUBP50607 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TUBP50607 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TUBP50607 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBP50607 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TUBP50607 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TUBP50607 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms