Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.28■□□□□ 0.2
PRIM2P49643 AC092053.1-201ENST00000605787 1936 ntBASIC16.28■□□□□ 0.2
PRIM2P49643 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PRIM2P49643 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 POM121L3P-201ENST00000419331 1163 ntBASIC16.28■□□□□ 0.2
PRIM2P49643 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.28■□□□□ 0.2
PRIM2P49643 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.28■□□□□ 0.2
PRIM2P49643 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 AP000867.3-201ENST00000524675 377 ntBASIC16.28■□□□□ 0.2
PRIM2P49643 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.28■□□□□ 0.2
PRIM2P49643 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PRIM2P49643 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.28■□□□□ 0.2
PRIM2P49643 STK25P1-201ENST00000585406 838 ntBASIC16.28■□□□□ 0.2
PRIM2P49643 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.28■□□□□ 0.2
PRIM2P49643 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.28■□□□□ 0.2
PRIM2P49643 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PRIM2P49643 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRIM2P49643 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.28■□□□□ 0.2
PRIM2P49643 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PRIM2P49643 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
PRIM2P49643 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.28■□□□□ 0.2
PRIM2P49643 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
PRIM2P49643 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRIM2P49643 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRIM2P49643 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRIM2P49643 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.27■□□□□ 0.2
PRIM2P49643 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.27■□□□□ 0.2
PRIM2P49643 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PRIM2P49643 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.27■□□□□ 0.2
PRIM2P49643 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 IGHV3-47-201ENST00000425060 335 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 ATP5G2P1-201ENST00000433580 426 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 STK19B-204ENST00000512515 211 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PRIM2P49643 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.27■□□□□ 0.2
PRIM2P49643 MIR3180-1-201ENST00000580374 94 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 MIR3180-3-201ENST00000584616 94 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 NPAP1P7-201ENST00000613027 823 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PRIM2P49643 AC093458.2-201ENST00000623150 629 ntBASIC16.27■□□□□ 0.2
PRIM2P49643 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRIM2P49643 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.27■□□□□ 0.2
PRIM2P49643 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PRIM2P49643 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
PRIM2P49643 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PRIM2P49643 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.27■□□□□ 0.19
PRIM2P49643 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.27■□□□□ 0.19
PRIM2P49643 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.27■□□□□ 0.19
PRIM2P49643 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.27■□□□□ 0.19
PRIM2P49643 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.27■□□□□ 0.19
PRIM2P49643 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PRIM2P49643 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.27■□□□□ 0.19
PRIM2P49643 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRIM2P49643 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRIM2P49643 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRIM2P49643 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRIM2P49643 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.26■□□□□ 0.19
PRIM2P49643 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRIM2P49643 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRIM2P49643 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRIM2P49643 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.26■□□□□ 0.19
PRIM2P49643 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.26■□□□□ 0.19
PRIM2P49643 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRIM2P49643 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.26■□□□□ 0.19
PRIM2P49643 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PRIM2P49643 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRIM2P49643 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.26■□□□□ 0.19
PRIM2P49643 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRIM2P49643 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms