Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC34P49427 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.52□□□□□ -0.24
CDC34P49427 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.52□□□□□ -0.24
CDC34P49427 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
CDC34P49427 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC34P49427 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDC34P49427 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC34P49427 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC34P49427 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 AP002490.2-201ENST00000524791 560 ntBASIC13.52□□□□□ -0.25
CDC34P49427 AC024563.2-201ENST00000603282 481 ntBASIC13.52□□□□□ -0.25
CDC34P49427 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.52□□□□□ -0.25
CDC34P49427 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 EGFEM1P-202ENST00000431685 1563 ntBASIC13.52□□□□□ -0.25
CDC34P49427 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.52□□□□□ -0.25
CDC34P49427 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
CDC34P49427 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC34P49427 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 AC007663.1-201ENST00000438948 1240 ntBASIC13.51□□□□□ -0.25
CDC34P49427 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.51□□□□□ -0.25
CDC34P49427 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.51□□□□□ -0.25
CDC34P49427 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC34P49427 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC34P49427 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC34P49427 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms