Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A6P48664 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A6P48664 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A6P48664 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A6P48664 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A6P48664 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A6P48664 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A6P48664 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A6P48664 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC1A6P48664 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A6P48664 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A6P48664 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A6P48664 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A6P48664 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 AC112907.2-201ENST00000448639 330 ntBASIC16.8■□□□□ 0.28
SLC1A6P48664 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A6P48664 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A6P48664 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A6P48664 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A6P48664 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A6P48664 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A6P48664 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A6P48664 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A6P48664 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 AC087499.1-201ENST00000418141 1075 ntBASIC16.79■□□□□ 0.28
SLC1A6P48664 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A6P48664 AC117947.1-201ENST00000427448 529 ntBASIC16.79■□□□□ 0.28
SLC1A6P48664 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 HYMAI.1-201ENST00000620949 238 ntBASIC16.79■□□□□ 0.28
SLC1A6P48664 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A6P48664 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 PAUPAR-201ENST00000630360 2965 ntBASIC16.79■□□□□ 0.28
SLC1A6P48664 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A6P48664 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A6P48664 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A6P48664 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A6P48664 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A6P48664 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SLC1A6P48664 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A6P48664 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A6P48664 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A6P48664 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms