Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC1A1P43005 AC106795.1-205ENST00000512851 1056 ntBASIC17.86■□□□□ 0.45
SLC1A1P43005 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC1A1P43005 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SLC1A1P43005 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 AL353135.1-201ENST00000606729 504 ntBASIC17.86■□□□□ 0.45
SLC1A1P43005 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A1P43005 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A1P43005 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
SLC1A1P43005 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A1P43005 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
SLC1A1P43005 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 AC132008.2-207ENST00000454517 770 ntBASIC17.85■□□□□ 0.45
SLC1A1P43005 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A1P43005 AL590787.1-201ENST00000568856 1315 ntBASIC17.85■□□□□ 0.45
SLC1A1P43005 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.85■□□□□ 0.45
SLC1A1P43005 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A1P43005 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A1P43005 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A1P43005 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A1P43005 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC1A1P43005 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SLC1A1P43005 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 KRT8P49-201ENST00000604166 1432 ntBASIC17.84■□□□□ 0.45
SLC1A1P43005 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 HLA-J-202ENST00000469281 1241 ntBASIC17.84■□□□□ 0.45
SLC1A1P43005 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SLC1A1P43005 KRT18P35-201ENST00000510488 1269 ntBASIC17.84■□□□□ 0.45
SLC1A1P43005 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC1A1P43005 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC1A1P43005 TERC-201ENST00000602385 541 ntBASIC17.84■□□□□ 0.45
SLC1A1P43005 AP001269.4-201ENST00000609611 512 ntBASIC17.84■□□□□ 0.45
SLC1A1P43005 AL022326.1-202ENST00000641533 845 ntBASIC17.84■□□□□ 0.45
SLC1A1P43005 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC1A1P43005 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A1P43005 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC1A1P43005 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A1P43005 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A1P43005 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
SLC1A1P43005 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A1P43005 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SLC1A1P43005 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A1P43005 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SLC1A1P43005 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A1P43005 NCF1C-201ENST00000438382 1427 ntBASIC17.83■□□□□ 0.45
SLC1A1P43005 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A1P43005 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.83■□□□□ 0.45
SLC1A1P43005 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SLC1A1P43005 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A1P43005 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SLC1A1P43005 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A1P43005 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SLC1A1P43005 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A1P43005 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A1P43005 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC1A1P43005 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A1P43005 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SLC1A1P43005 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SLC1A1P43005 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A1P43005 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
SLC1A1P43005 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A1P43005 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A1P43005 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SLC1A1P43005 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SLC1A1P43005 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A1P43005 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms