Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.72■□□□□ 0.11
SLC1A3P43003 AL732292.2-201ENST00000609649 430 ntBASIC15.72■□□□□ 0.11
SLC1A3P43003 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC1A3P43003 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SLC1A3P43003 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SLC1A3P43003 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC1A3P43003 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC1A3P43003 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
SLC1A3P43003 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC1A3P43003 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC1A3P43003 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC1A3P43003 AL603756.1-201ENST00000606511 2163 ntBASIC15.72■□□□□ 0.11
SLC1A3P43003 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SLC1A3P43003 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC1A3P43003 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC1A3P43003 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 PRYP5-201ENST00000451909 266 ntBASIC15.71■□□□□ 0.11
SLC1A3P43003 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC1A3P43003 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC1A3P43003 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC1A3P43003 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A3P43003 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC1A3P43003 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A3P43003 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.71■□□□□ 0.1
SLC1A3P43003 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.71■□□□□ 0.1
SLC1A3P43003 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A3P43003 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.71■□□□□ 0.1
SLC1A3P43003 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.1
SLC1A3P43003 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC1A3P43003 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC1A3P43003 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 LINC01711-201ENST00000598340 967 ntBASIC15.7■□□□□ 0.1
SLC1A3P43003 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A3P43003 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
SLC1A3P43003 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms