Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.6□□□□□ -0.39
CKS2P33552 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.6□□□□□ -0.39
CKS2P33552 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
CKS2P33552 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.6□□□□□ -0.39
CKS2P33552 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 AL365203.3-201ENST00000609742 2057 ntBASIC12.6□□□□□ -0.39
CKS2P33552 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS2P33552 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS2P33552 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS2P33552 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CKS2P33552 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 FAM197Y1-201ENST00000421178 764 ntBASIC12.59□□□□□ -0.39
CKS2P33552 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.59□□□□□ -0.39
CKS2P33552 TSPY17P-201ENST00000450329 467 ntBASIC12.59□□□□□ -0.39
CKS2P33552 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 AC113404.2-201ENST00000507884 177 ntBASIC12.59□□□□□ -0.39
CKS2P33552 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.59□□□□□ -0.39
CKS2P33552 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.59□□□□□ -0.39
CKS2P33552 AC142086.2-201ENST00000569753 217 ntBASIC12.59□□□□□ -0.39
CKS2P33552 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.59□□□□□ -0.39
CKS2P33552 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS2P33552 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.59□□□□□ -0.39
CKS2P33552 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 DBET-201ENST00000630918 3363 ntBASIC12.59□□□□□ -0.39
CKS2P33552 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 AC023824.1-201ENST00000562945 2975 ntBASIC12.59□□□□□ -0.39
CKS2P33552 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS2P33552 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS2P33552 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.58□□□□□ -0.39
CKS2P33552 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CKS2P33552 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CKS2P33552 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CKS2P33552 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms