Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 AC008735.3-201ENST00000596646 500 ntBASIC23.73■■□□□ 1.39
CPS1P31327 TECR-220ENST00000600083 1204 ntTSL 2 BASIC23.73■■□□□ 1.39
CPS1P31327 AC244093.1-201ENST00000610837 814 ntBASIC23.73■■□□□ 1.39
CPS1P31327 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC23.73■■□□□ 1.39
CPS1P31327 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC23.73■■□□□ 1.39
CPS1P31327 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CPS1P31327 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPS1P31327 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.72■■□□□ 1.39
CPS1P31327 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.72■■□□□ 1.39
CPS1P31327 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPS1P31327 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPS1P31327 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPS1P31327 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CPS1P31327 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPS1P31327 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC23.72■■□□□ 1.39
CPS1P31327 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC23.72■■□□□ 1.39
CPS1P31327 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPS1P31327 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.72■■□□□ 1.39
CPS1P31327 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC23.72■■□□□ 1.39
CPS1P31327 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC23.72■■□□□ 1.39
CPS1P31327 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC23.71■■□□□ 1.39
CPS1P31327 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 HLA-H-201ENST00000383620 1096 ntBASIC23.71■■□□□ 1.39
CPS1P31327 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC23.71■■□□□ 1.39
CPS1P31327 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC23.71■■□□□ 1.39
CPS1P31327 AL355994.2-201ENST00000447882 704 ntBASIC23.71■■□□□ 1.39
CPS1P31327 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC23.71■■□□□ 1.39
CPS1P31327 SPDYE18-201ENST00000510091 1050 ntBASIC23.71■■□□□ 1.39
CPS1P31327 BANF1P1-201ENST00000553684 263 ntBASIC23.71■■□□□ 1.39
CPS1P31327 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC23.71■■□□□ 1.39
CPS1P31327 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CPS1P31327 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPS1P31327 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CPS1P31327 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CPS1P31327 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CPS1P31327 AC104581.1-202ENST00000635932 2618 ntBASIC23.7■■□□□ 1.39
CPS1P31327 OSM-203ENST00000403463 464 ntTSL 3 BASIC23.7■■□□□ 1.38
CPS1P31327 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPS1P31327 RN7SL219P-201ENST00000582872 296 ntBASIC23.7■■□□□ 1.38
CPS1P31327 LINC00895-201ENST00000629028 1637 ntBASIC23.7■■□□□ 1.38
CPS1P31327 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.7■■□□□ 1.38
CPS1P31327 BICD1-207ENST00000551848 1962 ntBASIC23.7■■□□□ 1.38
CPS1P31327 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.7■■□□□ 1.38
CPS1P31327 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC23.7■■□□□ 1.38
CPS1P31327 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.7■■□□□ 1.38
CPS1P31327 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC23.7■■□□□ 1.38
CPS1P31327 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPS1P31327 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPS1P31327 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPS1P31327 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC23.7■■□□□ 1.38
CPS1P31327 ABALON-201ENST00000629058 1903 ntBASIC23.7■■□□□ 1.38
CPS1P31327 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 PP14571-201ENST00000404327 934 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC23.69■■□□□ 1.38
CPS1P31327 LITAF-210ENST00000571976 548 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 LITAF-214ENST00000574703 486 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 AC103810.3-201ENST00000583567 96 ntBASIC23.69■■□□□ 1.38
CPS1P31327 AL589739.1-201ENST00000607720 493 ntBASIC23.69■■□□□ 1.38
CPS1P31327 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.69■■□□□ 1.38
CPS1P31327 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CPS1P31327 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 FOXO1B-201ENST00000504678 1527 ntBASIC23.69■■□□□ 1.38
CPS1P31327 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CPS1P31327 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC23.69■■□□□ 1.38
CPS1P31327 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms