Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPN3P26045 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN3P26045 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPN3P26045 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN3P26045 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 AC006504.4-201ENST00000592118 1568 ntBASIC17.39■□□□□ 0.37
PTPN3P26045 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN3P26045 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PTPN3P26045 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN3P26045 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTPN3P26045 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN3P26045 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN3P26045 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PTPN3P26045 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PTPN3P26045 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PTPN3P26045 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 PTCHD3P3-201ENST00000403073 906 ntBASIC17.38■□□□□ 0.37
PTPN3P26045 RPS2P1-201ENST00000434010 821 ntBASIC17.38■□□□□ 0.37
PTPN3P26045 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 AL121912.1-201ENST00000603683 238 ntBASIC17.38■□□□□ 0.37
PTPN3P26045 AL691432.3-201ENST00000621860 400 ntBASIC17.38■□□□□ 0.37
PTPN3P26045 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN3P26045 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.38■□□□□ 0.37
PTPN3P26045 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
PTPN3P26045 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 AL645728.1-201ENST00000366221 2101 ntBASIC17.38■□□□□ 0.37
PTPN3P26045 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
PTPN3P26045 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN3P26045 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN3P26045 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTPN3P26045 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
PTPN3P26045 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN3P26045 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 PAWRP1-201ENST00000451083 565 ntBASIC17.37■□□□□ 0.37
PTPN3P26045 RNPS1P1-201ENST00000507437 918 ntBASIC17.37■□□□□ 0.37
PTPN3P26045 AC073648.2-201ENST00000510116 352 ntBASIC17.37■□□□□ 0.37
PTPN3P26045 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN3P26045 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PTPN3P26045 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN3P26045 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
PTPN3P26045 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN3P26045 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN3P26045 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTPN3P26045 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN3P26045 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN3P26045 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms