Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP11P24347 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
MMP11P24347 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MMP11P24347 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 PTCHD3P3-201ENST00000403073 906 ntBASIC16.2■□□□□ 0.18
MMP11P24347 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.2■□□□□ 0.18
MMP11P24347 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 GPX1P2-201ENST00000429271 606 ntBASIC16.2■□□□□ 0.18
MMP11P24347 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP11P24347 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP11P24347 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP11P24347 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.2■□□□□ 0.18
MMP11P24347 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
MMP11P24347 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.2■□□□□ 0.18
MMP11P24347 AC004790.2-201ENST00000623588 572 ntBASIC16.2■□□□□ 0.18
MMP11P24347 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
MMP11P24347 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP11P24347 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP11P24347 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP11P24347 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP11P24347 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MMP11P24347 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP11P24347 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
MMP11P24347 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 MRPL20P1-201ENST00000400819 433 ntBASIC16.19■□□□□ 0.18
MMP11P24347 RPSAP43-201ENST00000402237 625 ntBASIC16.19■□□□□ 0.18
MMP11P24347 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 AC023274.1-201ENST00000418278 595 ntBASIC16.19■□□□□ 0.18
MMP11P24347 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP11P24347 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP11P24347 KRT18P2-201ENST00000447938 1258 ntBASIC16.19■□□□□ 0.18
MMP11P24347 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP11P24347 AC010327.4-202ENST00000591484 748 ntBASIC16.19■□□□□ 0.18
MMP11P24347 MTDHP5-201ENST00000598980 586 ntBASIC16.19■□□□□ 0.18
MMP11P24347 AC010654.1-201ENST00000615722 808 ntBASIC16.19■□□□□ 0.18
MMP11P24347 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP11P24347 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 AC046185.3-201ENST00000623228 1824 ntBASIC16.19■□□□□ 0.18
MMP11P24347 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP11P24347 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MMP11P24347 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP11P24347 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP11P24347 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MMP11P24347 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP11P24347 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
MMP11P24347 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP11P24347 HCG4B-203ENST00000450128 991 ntBASIC16.18■□□□□ 0.18
MMP11P24347 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP11P24347 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP11P24347 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP11P24347 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP11P24347 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP11P24347 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms