Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFSF4P23510 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.61□□□□□ -0.07
TNFSF4P23510 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 RPS15P9-201ENST00000494093 319 ntBASIC14.61□□□□□ -0.07
TNFSF4P23510 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 AC116407.3-201ENST00000623905 1129 ntBASIC14.61□□□□□ -0.07
TNFSF4P23510 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TNFSF4P23510 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TNFSF4P23510 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFSF4P23510 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFSF4P23510 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFSF4P23510 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 AC006504.4-201ENST00000592118 1568 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.6□□□□□ -0.07
TNFSF4P23510 AC098831.1-202ENST00000438821 336 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.6□□□□□ -0.07
TNFSF4P23510 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFSF4P23510 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.6□□□□□ -0.07
TNFSF4P23510 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.6□□□□□ -0.07
TNFSF4P23510 AC120114.3-201ENST00000611923 658 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 BX640515.1-201ENST00000617215 977 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 AF228730.7-201ENST00000641842 219 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 AP002414.3-201ENST00000589352 1468 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFSF4P23510 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 AL590787.1-201ENST00000568856 1315 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 CROCCP2-202ENST00000412962 2773 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TNFSF4P23510 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFSF4P23510 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TNFSF4P23510 EGFEM1P-202ENST00000431685 1563 ntBASIC14.6□□□□□ -0.07
TNFSF4P23510 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TNFSF4P23510 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFSF4P23510 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TNFSF4P23510 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.59□□□□□ -0.07
TNFSF4P23510 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TNFSF4P23510 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms