Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.66□□□□□ -0.06
CCL1P22362 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CCL1P22362 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CCL1P22362 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL1P22362 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL1P22362 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL1P22362 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL1P22362 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL1P22362 BX005266.1-201ENST00000473402 457 ntBASIC14.66□□□□□ -0.06
CCL1P22362 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL1P22362 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL1P22362 AC138894.3-201ENST00000603787 634 ntBASIC14.66□□□□□ -0.06
CCL1P22362 AL139424.1-201ENST00000607572 797 ntBASIC14.66□□□□□ -0.06
CCL1P22362 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 AL589182.2-201ENST00000619332 1049 ntBASIC14.66□□□□□ -0.06
CCL1P22362 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL1P22362 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCL1P22362 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.66□□□□□ -0.06
CCL1P22362 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CCL1P22362 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL1P22362 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL1P22362 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCL1P22362 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 TOP3BP1-201ENST00000420768 1380 ntBASIC14.65□□□□□ -0.06
CCL1P22362 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 KRT18P35-201ENST00000510488 1269 ntBASIC14.65□□□□□ -0.06
CCL1P22362 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL1P22362 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL1P22362 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
CCL1P22362 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.65□□□□□ -0.06
CCL1P22362 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CCL1P22362 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL1P22362 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL1P22362 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL1P22362 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL1P22362 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.07
CCL1P22362 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
CCL1P22362 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.65□□□□□ -0.07
CCL1P22362 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCL1P22362 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL1P22362 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 AL391005.1-201ENST00000623953 2435 ntBASIC14.64□□□□□ -0.07
CCL1P22362 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms