Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB4AP20338 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 MIR149-201ENST00000384879 89 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 AC004980.1-204ENST00000429707 299 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 CROCCP5-201ENST00000436658 830 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB4AP20338 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB4AP20338 CKBP1-201ENST00000565489 1086 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 AC022517.1-201ENST00000592429 346 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB4AP20338 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RAB4AP20338 AL163051.1-201ENST00000569214 1512 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 AC079328.2-201ENST00000561241 3354 ntBASIC13.12□□□□□ -0.31
RAB4AP20338 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB4AP20338 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RAB4AP20338 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RAB4AP20338 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB4AP20338 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB4AP20338 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB4AP20338 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB4AP20338 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 SNX18-202ENST00000343017 3140 ntBASIC13.11□□□□□ -0.31
RAB4AP20338 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RAB4AP20338 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms