Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL3P19876 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL3P19876 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CXCL3P19876 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CXCL3P19876 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCL3P19876 AC026366.1-201ENST00000488803 879 ntBASIC14.34□□□□□ -0.11
CXCL3P19876 RNA5SP413-201ENST00000516373 109 ntBASIC14.34□□□□□ -0.11
CXCL3P19876 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.34□□□□□ -0.11
CXCL3P19876 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCL3P19876 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CXCL3P19876 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL3P19876 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL3P19876 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL3P19876 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL3P19876 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
CXCL3P19876 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.33□□□□□ -0.11
CXCL3P19876 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL3P19876 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.33□□□□□ -0.11
CXCL3P19876 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL3P19876 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL3P19876 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.33□□□□□ -0.11
CXCL3P19876 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CXCL3P19876 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL3P19876 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.33□□□□□ -0.11
CXCL3P19876 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.33□□□□□ -0.11
CXCL3P19876 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL3P19876 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL3P19876 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CXCL3P19876 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCL3P19876 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL3P19876 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CXCL3P19876 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CXCL3P19876 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCL3P19876 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
CXCL3P19876 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CXCL3P19876 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 AL359258.3-201ENST00000622910 2331 ntBASIC14.33□□□□□ -0.12
CXCL3P19876 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CXCL3P19876 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL3P19876 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL3P19876 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CXCL3P19876 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL3P19876 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CXCL3P19876 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL3P19876 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL3P19876 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL3P19876 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CXCL3P19876 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms