Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
CTPS1P17812 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS1P17812 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CTPS1P17812 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTPS1P17812 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS1P17812 AC007967.2-201ENST00000432613 625 ntBASIC17.15■□□□□ 0.34
CTPS1P17812 AC087163.2-201ENST00000457299 853 ntBASIC17.15■□□□□ 0.34
CTPS1P17812 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 AC145285.3-201ENST00000564603 959 ntBASIC17.15■□□□□ 0.34
CTPS1P17812 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS1P17812 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS1P17812 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CTPS1P17812 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTPS1P17812 GGTLC5P-201ENST00000617623 998 ntBASIC17.15■□□□□ 0.34
CTPS1P17812 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS1P17812 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CTPS1P17812 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS1P17812 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CTPS1P17812 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CTPS1P17812 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTPS1P17812 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CTPS1P17812 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.14■□□□□ 0.33
CTPS1P17812 MRPL20P1-201ENST00000400819 433 ntBASIC17.14■□□□□ 0.33
CTPS1P17812 MIR940-201ENST00000401276 94 ntBASIC17.14■□□□□ 0.33
CTPS1P17812 SLC25A6P2-201ENST00000497974 877 ntBASIC17.14■□□□□ 0.33
CTPS1P17812 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.14■□□□□ 0.33
CTPS1P17812 AC106730.1-201ENST00000566722 1090 ntBASIC17.14■□□□□ 0.33
CTPS1P17812 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.14■□□□□ 0.33
CTPS1P17812 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS1P17812 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 ZNF259P1-201ENST00000407656 1365 ntBASIC17.14■□□□□ 0.33
CTPS1P17812 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.14■□□□□ 0.33
CTPS1P17812 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS1P17812 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTPS1P17812 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.13■□□□□ 0.33
CTPS1P17812 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.13■□□□□ 0.33
CTPS1P17812 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.13■□□□□ 0.33
CTPS1P17812 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTPS1P17812 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTPS1P17812 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTPS1P17812 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.13■□□□□ 0.33
CTPS1P17812 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.13■□□□□ 0.33
CTPS1P17812 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTPS1P17812 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTPS1P17812 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.12■□□□□ 0.33
CTPS1P17812 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTPS1P17812 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
CTPS1P17812 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTPS1P17812 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTPS1P17812 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTPS1P17812 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.12■□□□□ 0.33
CTPS1P17812 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms