Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.98■□□□□ 0.47
KRT3P12035 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRT3P12035 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRT3P12035 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRT3P12035 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
KRT3P12035 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRT3P12035 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.98■□□□□ 0.47
KRT3P12035 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRT3P12035 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KRT3P12035 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
KRT3P12035 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.97■□□□□ 0.47
KRT3P12035 AP002414.1-201ENST00000391405 1147 ntBASIC17.97■□□□□ 0.47
KRT3P12035 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT3P12035 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT3P12035 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT3P12035 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT3P12035 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.97■□□□□ 0.47
KRT3P12035 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.97■□□□□ 0.47
KRT3P12035 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.97■□□□□ 0.47
KRT3P12035 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 AC004706.3-202ENST00000621574 984 ntBASIC17.97■□□□□ 0.47
KRT3P12035 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
KRT3P12035 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.97■□□□□ 0.47
KRT3P12035 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT3P12035 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.97■□□□□ 0.47
KRT3P12035 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT3P12035 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.96■□□□□ 0.47
KRT3P12035 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT3P12035 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KRT3P12035 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
KRT3P12035 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT3P12035 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT3P12035 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
KRT3P12035 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
KRT3P12035 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT3P12035 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 AGGF1P2-201ENST00000426656 2106 ntBASIC17.95■□□□□ 0.46
KRT3P12035 AC243591.1-201ENST00000452967 1364 ntBASIC17.95■□□□□ 0.46
KRT3P12035 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT3P12035 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT3P12035 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
KRT3P12035 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT3P12035 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT3P12035 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT3P12035 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT3P12035 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT3P12035 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms