Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.83■□□□□ 0.12
UBL4AP11441 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
UBL4AP11441 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.83■□□□□ 0.12
UBL4AP11441 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBL4AP11441 MTDHP3-201ENST00000594186 672 ntBASIC15.83■□□□□ 0.12
UBL4AP11441 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBL4AP11441 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
UBL4AP11441 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBL4AP11441 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 AC097637.2-201ENST00000624096 1997 ntBASIC15.82■□□□□ 0.12
UBL4AP11441 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 ACTG1P4-201ENST00000425123 1122 ntBASIC15.82■□□□□ 0.12
UBL4AP11441 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 BX005266.1-201ENST00000473402 457 ntBASIC15.82■□□□□ 0.12
UBL4AP11441 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.82■□□□□ 0.12
UBL4AP11441 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.82■□□□□ 0.12
UBL4AP11441 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 AC008608.2-201ENST00000606089 416 ntBASIC15.82■□□□□ 0.12
UBL4AP11441 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 REXO1L6P-202ENST00000619970 1078 ntBASIC15.82■□□□□ 0.12
UBL4AP11441 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 AL355877.3-201ENST00000622820 899 ntBASIC15.82■□□□□ 0.12
UBL4AP11441 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
UBL4AP11441 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.82■□□□□ 0.12
UBL4AP11441 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBL4AP11441 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.81■□□□□ 0.12
UBL4AP11441 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
UBL4AP11441 SAPCD2P3-201ENST00000455031 850 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms