Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HOXC6P09630 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HOXC6P09630 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 RNF165-205ENST00000588679 2904 ntBASIC19.14■□□□□ 0.65
HOXC6P09630 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.13■□□□□ 0.65
HOXC6P09630 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.13■□□□□ 0.65
HOXC6P09630 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.13■□□□□ 0.65
HOXC6P09630 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.13■□□□□ 0.65
HOXC6P09630 AP005018.1-201ENST00000525475 301 ntBASIC19.13■□□□□ 0.65
HOXC6P09630 CR383656.12-201ENST00000549567 513 ntBASIC19.13■□□□□ 0.65
HOXC6P09630 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HOXC6P09630 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HOXC6P09630 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HOXC6P09630 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC6P09630 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC6P09630 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HOXC6P09630 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXC6P09630 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HOXC6P09630 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXC6P09630 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 MRPS18AP1-201ENST00000414458 589 ntBASIC19.12■□□□□ 0.65
HOXC6P09630 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXC6P09630 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXC6P09630 MIR4453-201ENST00000584019 89 ntBASIC19.12■□□□□ 0.65
HOXC6P09630 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.12■□□□□ 0.65
HOXC6P09630 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.12■□□□□ 0.65
HOXC6P09630 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXC6P09630 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HOXC6P09630 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC6P09630 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXC6P09630 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXC6P09630 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
HOXC6P09630 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXC6P09630 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.11■□□□□ 0.65
HOXC6P09630 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 SPDYE22P-201ENST00000582158 798 ntBASIC19.11■□□□□ 0.65
HOXC6P09630 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 AL358472.5-202ENST00000641448 1267 ntBASIC19.11■□□□□ 0.65
HOXC6P09630 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC6P09630 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC6P09630 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 AC016027.1-202ENST00000607927 1699 ntBASIC19.11■□□□□ 0.65
HOXC6P09630 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC6P09630 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 NOC2LP2-201ENST00000407594 1944 ntBASIC19.1■□□□□ 0.65
HOXC6P09630 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
HOXC6P09630 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 TSSK5P-201ENST00000423978 907 ntBASIC19.1■□□□□ 0.65
HOXC6P09630 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms