Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
CTSBP07858 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.09■□□□□ 0.17
CTSBP07858 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.09■□□□□ 0.17
CTSBP07858 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.09■□□□□ 0.17
CTSBP07858 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
CTSBP07858 AP001160.2-201ENST00000596071 487 ntBASIC16.09■□□□□ 0.17
CTSBP07858 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.09■□□□□ 0.17
CTSBP07858 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
CTSBP07858 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSBP07858 ELL2P1-201ENST00000413990 1906 ntBASIC16.09■□□□□ 0.17
CTSBP07858 TOP3BP1-201ENST00000420768 1380 ntBASIC16.09■□□□□ 0.17
CTSBP07858 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CTSBP07858 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSBP07858 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSBP07858 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSBP07858 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CTSBP07858 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSBP07858 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSBP07858 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CTSBP07858 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.08■□□□□ 0.17
CTSBP07858 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CTSBP07858 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CTSBP07858 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.08■□□□□ 0.17
CTSBP07858 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSBP07858 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CTSBP07858 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.08■□□□□ 0.16
CTSBP07858 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CTSBP07858 MIR4515-201ENST00000584082 81 ntBASIC16.08■□□□□ 0.16
CTSBP07858 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSBP07858 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSBP07858 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CTSBP07858 PCDHB17P-201ENST00000539533 2393 ntBASIC16.08■□□□□ 0.16
CTSBP07858 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CTSBP07858 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSBP07858 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSBP07858 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.08■□□□□ 0.16
CTSBP07858 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.07■□□□□ 0.16
CTSBP07858 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.07■□□□□ 0.16
CTSBP07858 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CTSBP07858 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.07■□□□□ 0.16
CTSBP07858 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CTSBP07858 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.07■□□□□ 0.16
CTSBP07858 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.07■□□□□ 0.16
CTSBP07858 MPDU1-223ENST00000582151 728 ntBASIC16.07■□□□□ 0.16
CTSBP07858 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 AC099522.2-201ENST00000607001 744 ntBASIC16.07■□□□□ 0.16
CTSBP07858 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CTSBP07858 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CTSBP07858 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.07■□□□□ 0.16
CTSBP07858 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSBP07858 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.06■□□□□ 0.16
CTSBP07858 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CTSBP07858 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSBP07858 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms