Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC122714.2-201ENST00000502787 707 ntBASIC14.37□□□□□ -0.11
CD74P04233 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.37□□□□□ -0.11
CD74P04233 AC142381.4-202ENST00000563973 229 ntBASIC14.37□□□□□ -0.11
CD74P04233 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.37□□□□□ -0.11
CD74P04233 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.37□□□□□ -0.11
CD74P04233 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.37□□□□□ -0.11
CD74P04233 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CD74P04233 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD74P04233 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.37□□□□□ -0.11
CD74P04233 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
CD74P04233 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
CD74P04233 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.36□□□□□ -0.11
CD74P04233 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.36□□□□□ -0.11
CD74P04233 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD74P04233 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CD74P04233 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD74P04233 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.36□□□□□ -0.11
CD74P04233 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.36□□□□□ -0.11
CD74P04233 MIR4785-201ENST00000585005 73 ntBASIC14.36□□□□□ -0.11
CD74P04233 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.36□□□□□ -0.11
CD74P04233 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.36□□□□□ -0.11
CD74P04233 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 LINC00895-201ENST00000629028 1637 ntBASIC14.36□□□□□ -0.11
CD74P04233 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD74P04233 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD74P04233 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
CD74P04233 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.36□□□□□ -0.11
CD74P04233 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD74P04233 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 AL603832.2-201ENST00000566195 2125 ntBASIC14.35□□□□□ -0.11
CD74P04233 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 AL596087.1-201ENST00000400979 1969 ntBASIC14.35□□□□□ -0.11
CD74P04233 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD74P04233 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.35□□□□□ -0.11
CD74P04233 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.35□□□□□ -0.11
CD74P04233 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.35□□□□□ -0.11
CD74P04233 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms