Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SPCS2P1-201ENST00000561636 679 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 STK25P1-201ENST00000585406 838 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 AC011467.4-201ENST00000594891 528 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 AC091812.2-201ENST00000619081 385 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PDGFAP04085 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 AL118508.1-201ENST00000613502 2345 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFAP04085 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFAP04085 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
PDGFAP04085 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFAP04085 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 AC074386.1-202ENST00000463561 864 ntBASIC15.98■□□□□ 0.15
PDGFAP04085 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFAP04085 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFAP04085 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDGFAP04085 AL353135.1-201ENST00000606729 504 ntBASIC15.98■□□□□ 0.15
PDGFAP04085 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDGFAP04085 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDGFAP04085 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDGFAP04085 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFAP04085 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
PDGFAP04085 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PDGFAP04085 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 AC012317.2-201ENST00000623305 2251 ntBASIC15.97■□□□□ 0.15
PDGFAP04085 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFAP04085 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFAP04085 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.97■□□□□ 0.15
PDGFAP04085 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDGFAP04085 STK19B-204ENST00000512515 211 ntBASIC15.97■□□□□ 0.15
PDGFAP04085 AP000344.2-201ENST00000512987 629 ntBASIC15.97■□□□□ 0.15
PDGFAP04085 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.97■□□□□ 0.15
PDGFAP04085 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFAP04085 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFAP04085 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFAP04085 AC092902.6-201ENST00000641783 218 ntBASIC15.97■□□□□ 0.15
PDGFAP04085 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PDGFAP04085 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFAP04085 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.97■□□□□ 0.15
PDGFAP04085 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.97■□□□□ 0.15
PDGFAP04085 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms