Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.42■□□□□ 0.54
CHRNA1P02708 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 AL138688.1-201ENST00000624851 1594 ntBASIC18.42■□□□□ 0.54
CHRNA1P02708 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA1P02708 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA1P02708 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA1P02708 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA1P02708 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 MIR661-201ENST00000384842 89 ntBASIC18.41■□□□□ 0.54
CHRNA1P02708 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.41■□□□□ 0.54
CHRNA1P02708 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CHRNA1P02708 SPDYE7P-202ENST00000420373 878 ntBASIC18.41■□□□□ 0.54
CHRNA1P02708 UGT1A2P-201ENST00000454886 866 ntBASIC18.41■□□□□ 0.54
CHRNA1P02708 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.41■□□□□ 0.54
CHRNA1P02708 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.41■□□□□ 0.54
CHRNA1P02708 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.41■□□□□ 0.54
CHRNA1P02708 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA1P02708 AP001350.2-201ENST00000625104 1094 ntBASIC18.41■□□□□ 0.54
CHRNA1P02708 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRNA1P02708 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 LINC00896-202ENST00000609602 2128 ntBASIC18.41■□□□□ 0.54
CHRNA1P02708 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA1P02708 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA1P02708 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CHRNA1P02708 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA1P02708 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 KRT8P49-201ENST00000604166 1432 ntBASIC18.4■□□□□ 0.54
CHRNA1P02708 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA1P02708 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHRNA1P02708 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA1P02708 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHRNA1P02708 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA1P02708 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA1P02708 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA1P02708 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA1P02708 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHRNA1P02708 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.4■□□□□ 0.54
CHRNA1P02708 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 MIR4492-201ENST00000581627 80 ntBASIC18.4■□□□□ 0.54
CHRNA1P02708 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHRNA1P02708 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA1P02708 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA1P02708 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
CHRNA1P02708 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.39■□□□□ 0.54
CHRNA1P02708 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA1P02708 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.39■□□□□ 0.54
CHRNA1P02708 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA1P02708 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA1P02708 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.39■□□□□ 0.53
CHRNA1P02708 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA1P02708 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA1P02708 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CHRNA1P02708 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CHRNA1P02708 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms