Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.96■□□□□ 0.31
PDGFBP01127 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PDGFBP01127 BANF1P1-201ENST00000553684 263 ntBASIC16.96■□□□□ 0.31
PDGFBP01127 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.96■□□□□ 0.31
PDGFBP01127 AP005482.1-201ENST00000563722 1273 ntBASIC16.96■□□□□ 0.31
PDGFBP01127 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 KRT8P44-201ENST00000441609 1350 ntBASIC16.96■□□□□ 0.31
PDGFBP01127 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
PDGFBP01127 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PDGFBP01127 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDGFBP01127 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDGFBP01127 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
PDGFBP01127 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.96■□□□□ 0.3
PDGFBP01127 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDGFBP01127 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 HLA-H-201ENST00000383620 1096 ntBASIC16.95■□□□□ 0.3
PDGFBP01127 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.95■□□□□ 0.3
PDGFBP01127 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.95■□□□□ 0.3
PDGFBP01127 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDGFBP01127 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFBP01127 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFBP01127 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFBP01127 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PDGFBP01127 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.94■□□□□ 0.3
PDGFBP01127 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 SLC7A15P-201ENST00000424028 1363 ntBASIC16.94■□□□□ 0.3
PDGFBP01127 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.94■□□□□ 0.3
PDGFBP01127 AL080243.2-201ENST00000418783 582 ntBASIC16.94■□□□□ 0.3
PDGFBP01127 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.94■□□□□ 0.3
PDGFBP01127 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 CTBP2P3-201ENST00000585629 1255 ntBASIC16.94■□□□□ 0.3
PDGFBP01127 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFBP01127 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDGFBP01127 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.94■□□□□ 0.3
PDGFBP01127 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDGFBP01127 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFBP01127 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 BTBD7P1-201ENST00000447253 1453 ntBASIC16.93■□□□□ 0.3
PDGFBP01127 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFBP01127 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFBP01127 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PDGFBP01127 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFBP01127 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms