Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC22.29■■□□□ 1.16
LTN1O94822 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC22.29■■□□□ 1.16
LTN1O94822 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.29■■□□□ 1.16
LTN1O94822 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC22.29■■□□□ 1.16
LTN1O94822 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.29■■□□□ 1.16
LTN1O94822 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.29■■□□□ 1.16
LTN1O94822 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 TUBB8P12-201ENST00000308911 1335 ntBASIC22.29■■□□□ 1.16
LTN1O94822 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 TUBB7P-202ENST00000428444 1305 ntBASIC22.29■■□□□ 1.16
LTN1O94822 TUBB8P7-204ENST00000567960 1332 ntBASIC22.29■■□□□ 1.16
LTN1O94822 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.29■■□□□ 1.16
LTN1O94822 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 CROCCP2-202ENST00000412962 2773 ntBASIC22.29■■□□□ 1.16
LTN1O94822 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
LTN1O94822 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.29■■□□□ 1.16
LTN1O94822 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.29■■□□□ 1.16
LTN1O94822 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC22.29■■□□□ 1.16
LTN1O94822 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LTN1O94822 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LTN1O94822 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
LTN1O94822 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
LTN1O94822 WDR53-204ENST00000433160 887 ntTSL 5 BASIC22.28■■□□□ 1.16
LTN1O94822 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.28■■□□□ 1.16
LTN1O94822 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LTN1O94822 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC22.28■■□□□ 1.16
LTN1O94822 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.28■■□□□ 1.16
LTN1O94822 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.28■■□□□ 1.16
LTN1O94822 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.28■■□□□ 1.16
LTN1O94822 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LTN1O94822 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LTN1O94822 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LTN1O94822 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.28■■□□□ 1.16
LTN1O94822 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LTN1O94822 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
LTN1O94822 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.27■■□□□ 1.16
LTN1O94822 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 AL133215.2-201ENST00000609242 977 ntBASIC22.27■■□□□ 1.16
LTN1O94822 SNX33P1-201ENST00000592116 1762 ntBASIC22.27■■□□□ 1.16
LTN1O94822 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC22.27■■□□□ 1.16
LTN1O94822 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.27■■□□□ 1.16
LTN1O94822 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.27■■□□□ 1.16
LTN1O94822 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
LTN1O94822 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 AL353705.2-201ENST00000428243 662 ntBASIC22.27■■□□□ 1.16
LTN1O94822 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
LTN1O94822 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.27■■□□□ 1.16
LTN1O94822 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.27■■□□□ 1.16
LTN1O94822 IGHV3-72-202ENST00000621503 303 ntBASIC22.27■■□□□ 1.16
LTN1O94822 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LTN1O94822 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC22.26■■□□□ 1.15
LTN1O94822 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LTN1O94822 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LTN1O94822 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 SPTLC1P1-201ENST00000447199 261 ntBASIC22.26■■□□□ 1.15
LTN1O94822 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.26■■□□□ 1.15
LTN1O94822 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.26■■□□□ 1.15
LTN1O94822 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC22.26■■□□□ 1.15
LTN1O94822 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC22.26■■□□□ 1.15
LTN1O94822 AC010336.2-201ENST00000564226 506 ntBASIC22.26■■□□□ 1.15
LTN1O94822 AL671710.1-201ENST00000610245 2349 ntBASIC22.26■■□□□ 1.15
LTN1O94822 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LTN1O94822 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.26■■□□□ 1.15
LTN1O94822 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LTN1O94822 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
LTN1O94822 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
LTN1O94822 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms