Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AC009949.1-201ENST00000623048 1830 ntBASIC16.92■□□□□ 0.3
PCDHGA12O60330 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 HLA-J-203ENST00000494367 1087 ntBASIC16.92■□□□□ 0.3
PCDHGA12O60330 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AC004449.1-201ENST00000564240 433 ntBASIC16.92■□□□□ 0.3
PCDHGA12O60330 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 AC004461.1-201ENST00000412461 403 ntBASIC16.91■□□□□ 0.3
PCDHGA12O60330 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 AL096865.1-201ENST00000606796 927 ntBASIC16.91■□□□□ 0.3
PCDHGA12O60330 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA12O60330 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA12O60330 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 PP12613-201ENST00000424958 2230 ntBASIC16.9■□□□□ 0.3
PCDHGA12O60330 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 FAM185BP-201ENST00000443595 716 ntBASIC16.9■□□□□ 0.3
PCDHGA12O60330 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 AC025678.2-201ENST00000562061 970 ntBASIC16.9■□□□□ 0.3
PCDHGA12O60330 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms