Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC11O43248 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC11O43248 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC11O43248 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
HOXC11O43248 AC015911.4-201ENST00000588022 1070 ntBASIC17.28■□□□□ 0.36
HOXC11O43248 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC11O43248 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.28■□□□□ 0.36
HOXC11O43248 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC11O43248 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC11O43248 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC11O43248 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC11O43248 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC11O43248 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC11O43248 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC11O43248 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC11O43248 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC11O43248 AC011270.2-201ENST00000624293 2550 ntBASIC17.27■□□□□ 0.36
HOXC11O43248 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC11O43248 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC11O43248 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC11O43248 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC11O43248 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC11O43248 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC11O43248 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HOXC11O43248 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HOXC11O43248 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC11O43248 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC11O43248 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.27■□□□□ 0.36
HOXC11O43248 MPDU1-223ENST00000582151 728 ntBASIC17.27■□□□□ 0.36
HOXC11O43248 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC11O43248 AL031055.1-201ENST00000606362 631 ntBASIC17.27■□□□□ 0.36
HOXC11O43248 AP001350.2-201ENST00000625104 1094 ntBASIC17.27■□□□□ 0.36
HOXC11O43248 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC11O43248 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC11O43248 BCL2-203ENST00000589955 5011 ntBASIC17.27■□□□□ 0.36
HOXC11O43248 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HOXC11O43248 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC11O43248 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC11O43248 KRT8P49-201ENST00000604166 1432 ntBASIC17.27■□□□□ 0.35
HOXC11O43248 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC11O43248 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC11O43248 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC11O43248 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC11O43248 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC11O43248 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC11O43248 AL021920.2-201ENST00000624828 1351 ntBASIC17.27■□□□□ 0.35
HOXC11O43248 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.27■□□□□ 0.35
HOXC11O43248 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC11O43248 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HOXC11O43248 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HOXC11O43248 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC11O43248 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC11O43248 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC11O43248 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.26■□□□□ 0.35
HOXC11O43248 SPCS2P4-201ENST00000436160 681 ntBASIC17.26■□□□□ 0.35
HOXC11O43248 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC11O43248 AC069335.1-201ENST00000489972 472 ntBASIC17.26■□□□□ 0.35
HOXC11O43248 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC11O43248 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC11O43248 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC11O43248 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HOXC11O43248 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC11O43248 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms