Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 AL049840.3-201ENST00000602669 611 ntBASIC16.32■□□□□ 0.2
PCDH17O14917 AL356488.2-201ENST00000602755 427 ntBASIC16.32■□□□□ 0.2
PCDH17O14917 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 AC004706.3-202ENST00000621574 984 ntBASIC16.32■□□□□ 0.2
PCDH17O14917 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.31■□□□□ 0.2
PCDH17O14917 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDH17O14917 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDH17O14917 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH17O14917 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDH17O14917 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.31■□□□□ 0.2
PCDH17O14917 AC098831.1-202ENST00000438821 336 ntBASIC16.31■□□□□ 0.2
PCDH17O14917 AC092910.1-201ENST00000482027 1129 ntBASIC16.31■□□□□ 0.2
PCDH17O14917 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.31■□□□□ 0.2
PCDH17O14917 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH17O14917 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDH17O14917 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDH17O14917 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH17O14917 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH17O14917 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDH17O14917 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH17O14917 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH17O14917 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDH17O14917 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDH17O14917 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDH17O14917 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH17O14917 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDH17O14917 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH17O14917 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDH17O14917 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 AL139424.1-201ENST00000607572 797 ntBASIC16.3■□□□□ 0.2
PCDH17O14917 Z83851.2-201ENST00000609564 659 ntBASIC16.3■□□□□ 0.2
PCDH17O14917 FAM197Y3-203ENST00000618346 717 ntBASIC16.3■□□□□ 0.2
PCDH17O14917 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PCDH17O14917 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms