Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.66■□□□□ 0.26
E2F3O00716 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
E2F3O00716 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
E2F3O00716 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.66■□□□□ 0.26
E2F3O00716 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.66■□□□□ 0.26
E2F3O00716 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.66■□□□□ 0.26
E2F3O00716 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
E2F3O00716 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
E2F3O00716 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.66■□□□□ 0.26
E2F3O00716 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
E2F3O00716 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.65■□□□□ 0.26
E2F3O00716 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 SAPCD2P3-201ENST00000455031 850 ntBASIC16.65■□□□□ 0.26
E2F3O00716 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 DUX4L17-201ENST00000557360 1267 ntBASIC16.65■□□□□ 0.26
E2F3O00716 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.65■□□□□ 0.26
E2F3O00716 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.65■□□□□ 0.26
E2F3O00716 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.65■□□□□ 0.26
E2F3O00716 AL591684.3-201ENST00000605187 298 ntBASIC16.65■□□□□ 0.26
E2F3O00716 AC120114.3-201ENST00000611923 658 ntBASIC16.65■□□□□ 0.26
E2F3O00716 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 TNRC18P3-201ENST00000441896 2691 ntBASIC16.65■□□□□ 0.26
E2F3O00716 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
E2F3O00716 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.65■□□□□ 0.26
E2F3O00716 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
E2F3O00716 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
E2F3O00716 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.64■□□□□ 0.25
E2F3O00716 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
E2F3O00716 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.64■□□□□ 0.25
E2F3O00716 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 AP005117.1-201ENST00000584346 1413 ntBASIC16.64■□□□□ 0.25
E2F3O00716 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.64■□□□□ 0.25
E2F3O00716 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 LINC00982-205ENST00000420957 435 ntBASIC16.64■□□□□ 0.25
E2F3O00716 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.64■□□□□ 0.25
E2F3O00716 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.64■□□□□ 0.25
E2F3O00716 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.64■□□□□ 0.25
E2F3O00716 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.64■□□□□ 0.25
E2F3O00716 AP001269.4-201ENST00000609611 512 ntBASIC16.64■□□□□ 0.25
E2F3O00716 REXO1L6P-202ENST00000619970 1078 ntBASIC16.64■□□□□ 0.25
E2F3O00716 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
E2F3O00716 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
E2F3O00716 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
E2F3O00716 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.64■□□□□ 0.25
E2F3O00716 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.64■□□□□ 0.25
E2F3O00716 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
E2F3O00716 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms