Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDC7O00311 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC7O00311 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
CDC7O00311 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 FGFR3P6-201ENST00000457012 610 ntBASIC16.75■□□□□ 0.27
CDC7O00311 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.75■□□□□ 0.27
CDC7O00311 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC7O00311 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.75■□□□□ 0.27
CDC7O00311 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 AL139288.1-201ENST00000623748 933 ntBASIC16.75■□□□□ 0.27
CDC7O00311 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CDC7O00311 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.75■□□□□ 0.27
CDC7O00311 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC7O00311 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
CDC7O00311 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC7O00311 AL645728.1-201ENST00000366221 2101 ntBASIC16.75■□□□□ 0.27
CDC7O00311 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDC7O00311 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC7O00311 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CDC7O00311 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC7O00311 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 AKR1C7P-201ENST00000305623 895 ntBASIC16.74■□□□□ 0.27
CDC7O00311 AP002414.1-201ENST00000391405 1147 ntBASIC16.74■□□□□ 0.27
CDC7O00311 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC7O00311 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC7O00311 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC7O00311 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC7O00311 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.74■□□□□ 0.27
CDC7O00311 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC7O00311 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 AC008608.2-201ENST00000606089 416 ntBASIC16.74■□□□□ 0.27
CDC7O00311 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC7O00311 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 PCDHB19P-201ENST00000570871 2371 ntBASIC16.74■□□□□ 0.27
CDC7O00311 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC7O00311 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC7O00311 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC7O00311 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC7O00311 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 NCF1C-201ENST00000438382 1427 ntBASIC16.73■□□□□ 0.27
CDC7O00311 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC7O00311 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.73■□□□□ 0.27
CDC7O00311 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.73■□□□□ 0.27
CDC7O00311 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.73■□□□□ 0.27
CDC7O00311 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CDC7O00311 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC7O00311 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 AC243591.1-201ENST00000452967 1364 ntBASIC16.73■□□□□ 0.27
CDC7O00311 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms