Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 MIR4751-201ENST00000578027 74 ntBASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 DNAJB3-202ENST00000449667 1266 ntBASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 RPS15P9-201ENST00000494093 319 ntBASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 SNHG9-202ENST00000564014 471 ntBASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 C20orf181-201ENST00000623918 480 ntBASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 BX276092.7-203ENST00000637198 1536 ntBASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMX2-CTNND1H3BSU7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC006504.4-201ENST00000592118 1568 ntBASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC132938.5-201ENST00000624980 1813 ntBASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC254562.1-201ENST00000417586 456 ntBASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 MKNK2P1-201ENST00000437526 628 ntBASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 YBX1P5-201ENST00000509441 847 ntBASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TMX2-CTNND1H3BSU7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms