Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 AL031284.1-201ENST00000419297 478 ntBASIC17.35■□□□□ 0.37
CAPN8A6NHC0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 AC006557.2-201ENST00000592985 1240 ntBASIC17.35■□□□□ 0.37
CAPN8A6NHC0 AL353135.1-201ENST00000606729 504 ntBASIC17.35■□□□□ 0.37
CAPN8A6NHC0 MIR7706-201ENST00000613747 67 ntBASIC17.35■□□□□ 0.37
CAPN8A6NHC0 FAM215A-202ENST00000632077 792 ntBASIC17.35■□□□□ 0.37
CAPN8A6NHC0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 AC116353.5-201ENST00000638148 1699 ntBASIC17.35■□□□□ 0.37
CAPN8A6NHC0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 RPS2P28-201ENST00000314255 741 ntBASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ZNF259P1-201ENST00000407656 1365 ntBASIC17.34■□□□□ 0.37
CAPN8A6NHC0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 RNA5SP419-201ENST00000515908 135 ntBASIC17.34■□□□□ 0.37
CAPN8A6NHC0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC004706.3-202ENST00000621574 984 ntBASIC17.34■□□□□ 0.37
CAPN8A6NHC0 AC008735.5-201ENST00000623544 497 ntBASIC17.34■□□□□ 0.37
CAPN8A6NHC0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CAPN8A6NHC0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN8A6NHC0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CAPN8A6NHC0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CAPN8A6NHC0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.33■□□□□ 0.37
CAPN8A6NHC0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN8A6NHC0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN8A6NHC0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms