Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 SUPT20HL2-201ENST00000486479 2409 ntBASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 TSPY23P-201ENST00000440136 739 ntBASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 TMBIM7P-203ENST00000641617 1718 ntBASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 AC013726.1-201ENST00000563747 2285 ntBASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 AC099521.3-201ENST00000624251 2938 ntBASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 HES6-204ENST00000409182 863 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms