Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AC022898.2-201ENST00000616822 1312 ntBASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX49Q9Y6V7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 AL590627.1-203ENST00000421194 1026 ntBASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 MTCL1P1-201ENST00000446207 792 ntBASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 AP001269.4-201ENST00000609611 512 ntBASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 AC079328.2-201ENST00000561241 3354 ntBASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX49Q9Y6V7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 POM121L3P-201ENST00000419331 1163 ntBASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 AL662844.1-201ENST00000546340 181 ntBASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms