Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 LINC00982-205ENST00000420957 435 ntBASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 CYP2T1P-202ENST00000641596 2535 ntBASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 AC079776.2-201ENST00000641154 1609 ntBASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 AL391005.1-201ENST00000623953 2435 ntBASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 LINC02199-201ENST00000506655 2702 ntBASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHA3Q9Y5H8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 AC104819.1-201ENST00000504587 486 ntBASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 AC012615.1-201ENST00000565797 1299 ntBASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 AC087388.1-201ENST00000571370 1112 ntBASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 MIR5100-201ENST00000579544 119 ntBASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 NPAP1P7-201ENST00000613027 823 ntBASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA3Q9Y5H8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 AL021920.2-201ENST00000624828 1351 ntBASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 AP000867.3-201ENST00000524675 377 ntBASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHA3Q9Y5H8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms