Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB1Q9Y5F3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHB1Q9Y5F3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 AC097637.2-201ENST00000624096 1997 ntBASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB1Q9Y5F3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 GPR89P-201ENST00000407924 1495 ntBASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 AC106820.2-201ENST00000563775 3264 ntBASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 AC080080.1-201ENST00000625121 2420 ntBASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB1Q9Y5F3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms