Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 AP001350.2-201ENST00000625104 1094 ntBASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 EGFEM1P-202ENST00000431685 1563 ntBASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB7Q9Y5E2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 SPDYE7P-202ENST00000420373 878 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AC107890.1-201ENST00000422478 521 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AC125807.1-201ENST00000483097 614 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AC087641.1-201ENST00000557561 1021 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AC026150.2-201ENST00000564693 1156 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AC091167.2-201ENST00000579581 588 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 AL031055.1-201ENST00000606362 631 ntBASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB7Q9Y5E2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
PCDHB7Q9Y5E2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 AC016396.2-201ENST00000562575 1417 ntBASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB7Q9Y5E2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 AC008677.1-201ENST00000519230 1561 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms