Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AP002490.2-201ENST00000524791 560 ntBASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AC026691.1-201ENST00000602502 2017 ntBASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AC073592.5-201ENST00000624854 528 ntBASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAF6Q9Y4K3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 VENTXP7-201ENST00000475503 772 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 DUX4L26-201ENST00000489078 1255 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 TUBB7P-202ENST00000428444 1305 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 HLA-A-202ENST00000376806 1854 ntBASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF6Q9Y4K3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAF6Q9Y4K3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAF6Q9Y4K3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.26
TRAF6Q9Y4K3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.64■□□□□ 0.26
TRAF6Q9Y4K3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms