Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FNDC3AQ9Y2H6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC3AQ9Y2H6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 AC002558.1-201ENST00000488906 803 ntBASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC3AQ9Y2H6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 KLF4P1-201ENST00000412782 1185 ntBASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 AC004817.3-201ENST00000602957 2129 ntBASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC3AQ9Y2H6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AC079776.2-201ENST00000641154 1609 ntBASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AC132938.5-201ENST00000624980 1813 ntBASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AL139327.4-201ENST00000612362 153 ntBASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AL022326.1-202ENST00000641533 845 ntBASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms