Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 AC100757.3-201ENST00000622361 1406 ntBASIC25.04■■□□□ 1.6
SHANK2Q9UPX8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 IGHV3-42-201ENST00000520410 361 ntBASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 LINC02560-201ENST00000596379 459 ntBASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC25.03■■□□□ 1.6
SHANK2Q9UPX8 CRB3P1-201ENST00000449338 276 ntBASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 MIR4453-201ENST00000584019 89 ntBASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 AC073439.1-201ENST00000624121 1774 ntBASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 AP3S2-216ENST00000617003 1561 ntBASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 CR383656.12-201ENST00000549567 513 ntBASIC25.02■■□□□ 1.6
SHANK2Q9UPX8 NEFHP1-201ENST00000412845 2629 ntBASIC25.01■■□□□ 1.6
SHANK2Q9UPX8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AC006277.1-201ENST00000624348 1610 ntBASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC25.01■■□□□ 1.59
SHANK2Q9UPX8 AC018529.1-201ENST00000613063 361 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms