Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AC097637.2-201ENST00000624096 1997 ntBASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 PP12613-201ENST00000424958 2230 ntBASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AC004967.1-201ENST00000453589 447 ntBASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AC108073.2-201ENST00000464002 357 ntBASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA1Q9UND3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 VN2R19P-201ENST00000442399 1052 ntBASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 AC004790.2-201ENST00000623588 572 ntBASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 AC134684.3-201ENST00000641758 218 ntBASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA1Q9UND3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.77■□□□□ 0.11
NPIPA1Q9UND3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms