Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 AC016957.2-201ENST00000616998 848 ntBASIC20.06■□□□□ 0.8
RNF216Q9NWF9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 AC068587.9-201ENST00000641814 219 ntBASIC20.06■□□□□ 0.8
RNF216Q9NWF9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF216Q9NWF9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 SNORD116-2-201ENST00000384274 95 ntBASIC20.05■□□□□ 0.8
RNF216Q9NWF9 SNORD116-6-201ENST00000384711 96 ntBASIC20.05■□□□□ 0.8
RNF216Q9NWF9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 MORF4L1P6-201ENST00000418771 268 ntBASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AC092634.2-201ENST00000428146 1010 ntBASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 KRT18P31-201ENST00000506277 1292 ntBASIC20.05■□□□□ 0.8
RNF216Q9NWF9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 ABALON-201ENST00000629058 1903 ntBASIC20.05■□□□□ 0.8
RNF216Q9NWF9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RNF216Q9NWF9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AL132656.3-201ENST00000606384 1595 ntBASIC20.04■□□□□ 0.8
RNF216Q9NWF9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 MTND5P25-201ENST00000430499 799 ntBASIC20.04■□□□□ 0.8
RNF216Q9NWF9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AC091435.1-201ENST00000505442 584 ntBASIC20.04■□□□□ 0.8
RNF216Q9NWF9 CIR1P1-201ENST00000524055 1133 ntBASIC20.04■□□□□ 0.8
RNF216Q9NWF9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 ELOCP35-201ENST00000604289 336 ntBASIC20.04■□□□□ 0.8
RNF216Q9NWF9 AC064872.1-201ENST00000604823 1072 ntBASIC20.04■□□□□ 0.8
RNF216Q9NWF9 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF216Q9NWF9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms