Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 AL845331.1-201ENST00000424978 1190 ntBASIC20.25■□□□□ 0.83
RTN4Q9NQC3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 AF186192.3-201ENST00000583427 947 ntBASIC20.25■□□□□ 0.83
RTN4Q9NQC3 AC006058.3-201ENST00000606217 1069 ntBASIC20.25■□□□□ 0.83
RTN4Q9NQC3 MIR6786-201ENST00000616843 113 ntBASIC20.25■□□□□ 0.83
RTN4Q9NQC3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 AC007191.1-201ENST00000623179 2995 ntBASIC20.25■□□□□ 0.83
RTN4Q9NQC3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AL365203.3-201ENST00000609742 2057 ntBASIC20.24■□□□□ 0.83
RTN4Q9NQC3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 MESTP1-201ENST00000404287 994 ntBASIC20.24■□□□□ 0.83
RTN4Q9NQC3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AL138688.1-201ENST00000624851 1594 ntBASIC20.24■□□□□ 0.83
RTN4Q9NQC3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTN4Q9NQC3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 AL161772.1-201ENST00000610494 4412 ntBASIC20.23■□□□□ 0.83
RTN4Q9NQC3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 RNF216P1-203ENST00000404404 2427 ntBASIC20.23■□□□□ 0.83
RTN4Q9NQC3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 AC073195.1-201ENST00000607241 877 ntBASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms