Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 EIF4HP1-201ENST00000453115 687 ntBASIC15.63■□□□□ 0.09
CHD8Q9HCK8 AC010328.2-201ENST00000597698 1111 ntBASIC15.63■□□□□ 0.09
CHD8Q9HCK8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.63■□□□□ 0.09
CHD8Q9HCK8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 AC104306.2-201ENST00000451877 341 ntBASIC15.63■□□□□ 0.09
CHD8Q9HCK8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 DUTP2-201ENST00000519164 463 ntBASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AP001889.1-201ENST00000525414 633 ntBASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AC105021.1-202ENST00000570572 669 ntBASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHD8Q9HCK8 AL096828.2-201ENST00000567259 1965 ntBASIC15.62■□□□□ 0.09
CHD8Q9HCK8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 AC092337.1-201ENST00000568699 1129 ntBASIC15.61■□□□□ 0.09
CHD8Q9HCK8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 SLC22A20-204ENST00000530038 1673 ntBASIC15.61■□□□□ 0.09
CHD8Q9HCK8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms