Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 MCCD1P2-201ENST00000423228 335 ntBASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0A4Q9HBG4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AC002310.6-201ENST00000624451 1377 ntBASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AC211486.1-202ENST00000416371 468 ntBASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 SLC25A6P2-201ENST00000497974 877 ntBASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AC211476.1-201ENST00000503899 468 ntBASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP6V0A4Q9HBG4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 IGLL3P-201ENST00000412472 434 ntBASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 AC005829.1-201ENST00000570002 483 ntBASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP6V0A4Q9HBG4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 AL023806.1-201ENST00000603994 1649 ntBASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP6V0A4Q9HBG4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms